Table 8. Statistically significant copy number variable regions and genes

CNVR Size CB Loss Gain IP Dys SCC Genes p-value
chr2:109953762-110091100 137,338 q13 2 4 0 1 5 LIMS3, RGPD5, RGPD6 0.03
chr9:35618094-35811244 193,150 p13.3 0 6 4 2 0 CA9, CCDC107, CD72, CREB3, GBA2, HINT2, LZIP, NPR2, PC3, RGP1, SIT1, SPAG8, TLN1, TPM2 0.002
chr11:51526726-51583396 56,670 p11.11 4 1 3 2 0 OR4C46 0.01
chr11:108050610-108170706 120,096 q22.3 3 0 3 0 0 DDX10 0.06
chr14:106796264-106988959 192,695 q32.33-NA 2 2 3 1 0 IGHV7-81 0.03
chr17:456304-598092 141,788 p13.3 0 3 3 0 0 FAM57A, GEMIN4, VPS53 0.06
chr19:502845-658531 155,686 p13.3 0 9 2 0 7 BSG, FGF22, FSTL3, HCN2, POLRMT, PRSSL1, RNF126 0.01
chr19:13008000-13263279 255,279 p13.13 0 9 5 2 2 CACNA1A, IER2, LYL1, NACC1, NFIX, STX10, TRMT1 0.02
Adopted from Shin et al.19) with permission of e-century.